AI for Automated Segmentation and Characterization of Median Nerve Volume

  • Jaidip M. Jagtap
  • , Tomoyuki Kuroiwa
  • , Julia Starlinger
  • , Mohammad Hosseini Farid
  • , Hayman Lui
  • , Zeynettin Akkus
  • , Bradley J. Erickson
  • , Peter Amadio

    Research output: Contribution to journalArticlepeer-review

    Abstract

    Purpose: Carpal tunnel syndrome (CTS) is characterized anatomically by enlargement of the median nerve (MN) at the wrist. To better understand the 3D morphology and volume of the enlargement, we studied its volume using automated segmentation of ultrasound (US) images in 10 volunteers and 4 patients diagnosed with CTS. Method: US images were acquired axially for a 4 cm MN segment from the proximal carpal tunnel region to mid-forearm in 10 volunteers and 4 patients with CTS, yielding over 18,000 images. We used U-Net with ConvNet blocks to create a model of MN segmentation for CTS study, compared to manual measurements by two readers. Results: The average Dice Similarity Coefficient (DSC) on the internal and external validation datasets was 0.82 and 0.81, respectively, and the area under the curve (AUC) was 0.92 and 0.88, respectively. The inter-reader correlation DSC was 0.83, and the AUC was 0.98. The correlation between U-Net and manual tracing was best when the MN was near the surface. A US phantom mimicking the MN, imaged at varied scanning speeds from 7 to 45 mm/s, showed the volume measurements were consistent. Conclusion: Our AI model effectively segmented the MN to calculate MN volume, which can now be studied as a potential biomarker for CTS, along with the already established biomarker, cross-sectional area.

    Original languageAmerican English
    Pages (from-to)405-416
    Number of pages12
    JournalJournal of Medical and Biological Engineering
    Volume43
    Issue number4
    DOIs
    StatePublished - Aug 4 2023

    Bibliographical note

    Publisher Copyright:
    © 2023, Taiwanese Society of Biomedical Engineering.

    Funding

    Funding for this work was provided by Mayo Clinic and a grant from NIH/NIAMS (AR62613). NIH/NIAMS had no involvement in study design; in the collection, analysis, and interpretation of data; in the writing of the report; and in the decision to submit the article.

    FundersFunder number
    National Institutes of Health
    National Institute of Arthritis and Musculoskeletal and Skin DiseasesAR62613
    Mayo Clinic

      ASJC Scopus Subject Areas

      • Biomedical Engineering

      Keywords

      • carpal tunnel syndrome
      • U-Net
      • Machine learning
      • ultrasound
      • median nerve
      • cross-sectional area
      • Carpal tunnel syndrome
      • Cross-sectional area
      • Median nerve
      • Ultrasound

      Disciplines

      • Biomedical Engineering and Bioengineering

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